bioRxiv @biorxivpreprint@social.cleverlibre.org

Targeted metagenomics using probe capture detects a larger diversity of nitrogen and methane cycling genes in complex microbial communities than traditional metagenomics https://www.biorxiv.org/content/10.1101/2022.11.04.515048

Autophagy is required in macrophages and dendritic cells to prevent early recruitment of neutrophils during Mycobacterium tuberculosis infection https://www.biorxiv.org/content/10.1101/2022.11.04.515221

Anti-HVEM mAb therapy improves antitumoral immunity both in vitro and in vivo, in a novel transgenic mouse model expressing human HVEM and BTLA molecules challenged with HVEM expressing tumors https://www.biorxiv.org/content/10.1101/2022.11.04.515180

A Peptide-Centric Quantitative Proteomics Dataset for the Phenotypic Assessment of Alzheimer's Disease https://www.biorxiv.org/content/10.1101/2022.11.04.515203

Methadone alters transcriptional programs associated with synapse formation in human cortical organoids https://www.biorxiv.org/content/10.1101/2022.11.04.515240

Measuring the 3D wake of swimming dice snakes using volumetric velocimetry https://www.biorxiv.org/content/10.1101/2022.11.04.515204

How to start a LINE: 5' switching rejuvenates LINE retrotransposons in tobacco and related Nicotiana species https://www.biorxiv.org/content/10.1101/2022.11.04.512097

Glutathione activates PHT1;5 gene via WRKY75 transcription factor to regulate phosphate homeostasis in Arabidopsis https://www.biorxiv.org/content/10.1101/2022.11.03.515049

The efficacy of chemotherapy is limited by intratumoural senescent cells that persist through the upregulation of PD-L2 https://www.biorxiv.org/content/10.1101/2022.11.04.501681

GSK-3484862 targets DNMT1 for degradation in cells https://www.biorxiv.org/content/10.1101/2022.11.03.514954

Epigenetic silencing by SMYD3 represses tumor intrinsic interferon response in HPV-negative squamous cell carcinoma of the head and neck. https://www.biorxiv.org/content/10.1101/2022.11.04.515098

SEPepQuant enables comprehensive protein isoform characterization in shotgun proteomics https://www.biorxiv.org/content/10.1101/2022.11.03.515027

TCR_Explore: a novel webtool for T cell receptor repertoire analysis https://www.biorxiv.org/content/10.1101/2022.11.03.514642

Generalized peakgroup scoring boosts identification rates and accuracy in mass spectrometry based discovery proteomics https://www.biorxiv.org/content/10.1101/2022.11.03.515031

Ensemble Clustering Combined with Clustering Optimization: A Novel Workflow for Analyzing Metabolomics Data https://www.biorxiv.org/content/10.1101/2022.11.03.515009

A graph clustering algorithm for detection and genotyping of structural variants from long reads https://www.biorxiv.org/content/10.1101/2022.11.04.515241

Adapting protein language models for rapid DTI prediction https://www.biorxiv.org/content/10.1101/2022.11.03.515084

Machine-learning based detection of adventitious microbes in T-cell therapy cultures using long read sequencing https://www.biorxiv.org/content/10.1101/2022.11.03.514634

Evolution-inspired augmentations improve deep learning for regulatory genomics https://www.biorxiv.org/content/10.1101/2022.11.03.515117

A Web/Cloud based Digital Pathology Platform Framework for AI Development and Deployment https://www.biorxiv.org/content/10.1101/2022.11.04.514741