Nicola Romanò @nicolaromano@social.cleverlibre.org

@brewsterkahle Not just avoiding paywalls, but also avoiding the encumbrance of getting access via all those different publisher interfaces, I reckon.

@villavelius @brewsterkahle yes! as far as I know, sci-hub is the only way to get PDFs by DOI via a proper API that you can use on the command line or in Python scripts (e.g. https://pypi.org/project/scidownl/ ). obviously this is really practical or even a necessity for larger-scale systematic literature research. so even if the publication is open-access or you have official access in some other way, sci-hub can just be much more practical to use.

“I dashed out to grab some drugstore makeup to paint our faces with insignia from Cars and Star Wars. The random blocks of bright white, iridescent gold, and thick blues and reds reminded me of the Zinc sunscreen my own mother painted on my face for our Disney trips in the 1980s. She was protecting us from sunburn, I was warding off facial recognition systems.” — @cyberlyra

https://www.publicbooks.org/data-free-disney/

#surveillance #capitalism #peopleFarming #disney

Here's an analysis I have done on editorial processing times in Hindawi special issues; https://psyarxiv.com/6mbgv. I think there's v circumstantial evidence for paper mill infestation.

Hello world! 📢

The #Bioconductor EuroBioc 2023 conference will be in Ghent, Belgium 🇧🇪 on the 20, 21, 22 September 2023. More details, including keynote speakers and calendar at https://eurobioc2023.bioconductor.org/

Oh, and abstract submissions are already open!

If you've ever wondered EXACTLY what is in
@NCBI
nt and nr (I certainly have!)

From https://youtu.be/2FW1dk5YQ3I?t=484 and https://youtu.be/KLBE0AuH-Sk?t=692 (cued to the right spots in the video)

#Bioinformatics #Genomics

𝚖𝚊𝚛𝚐𝚒𝚗𝚊𝚕𝚎𝚏𝚏𝚎𝚌𝚝𝚜 0.9.0 is a BIG📦release! Simple yet powerful tools to help you interpret the results of over 70 classes of models in #RStats (GLM, GAM, discrete choice, mixed-effects, bayesian, etc.) 🧵 on some cool new stuff. https://vincentarelbundock.github.io/marginaleffects/

Lots to like in the new #dplyr 1.1.0 release (which just hit CRAN). Obviously the new data.table-inspired `.by` and non-equi joins are highlights. But I just re-ran some standard benchmarks on my machine and its definitely faster too. E.g. A big grouped collapse on some NYC taxi data is about twice as fast as it used to be. #rstats

Anyone using minKNOW v 22.10.10? I've got a base caller problem... Guppy not recognised (Its the GPU version). Other people on the release notes page reporting the same.

* Can I install standalone Guppy and point minKNOW at it somehow?
* Or should it run if i disable live basecalling?

Tech support haven't answered me yet but I assume it's a proper problem if multiple users affected 😅
#ONT #nanopore #MinION #sequencing

This is big. Eight UK #universities are acting in concert to adopt #RightsRetention #OpenAccess policies. Their public statement comes out tomorrow. (#paywalled)
https://www.timeshighereducation.com/news/open-access-accord-weaken-publishers-negotiating-position

The action comes from the N8 Research Partnership universities — Durham, Lancaster, Leeds, Liverpool, Manchester, Newcastle, Sheffield, and York.

Thanks and congratulations to them all.

#AcademicMastodon @AcademicChatter

Illness is neither an indulgence for which people have to pay, nor an offence for which they should be penalised, but a misfortune, the cost of which should be shared by the community.
https://www.theguardian.com/politics/2023/jan/20/sajid-javid-calls-for-patients-to-pay-for-gp-and-ae-visits

I just set up couple of shiny servers, one at home and anoter in my cloud service provider. The process is quite easy but I had to mix up a few sources so, I decided to document it in my blog.

@rstats #rstats #debian #nginx #foss

https://blog.rwhitedwarf.com/post/deploy_shiny_on_debian/