#rnaseq #comparativegenomics folks ...
So, you have two species, each with its own reference genome. You want to compare #transcript abundance between the species using with RNA-seq reads. What do you do?

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@jlo_geno oops, I was trying to see if there was more text in the poll answers, and I can’t remove or change my answer even though I’m not quite sure what exactly I voted for!

It’s been a bit of time since I’ve done this sort of thing and I was just looking for more information. Sorry to skew the poll!

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