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From @RELenski post, How to Write a Response to Reviewers in Ten Easy Steps:

"Pay special attention to comments where two (or more) reviewers comment on the same issue. If they both agree (for example, they tell you to clarify or delete some passage), then that is almost certainly something you should do"

telliamedrevisited.wordpress.c

This year I finished one of the most fascinating projects I ever worked on.

Together with a team of researchers from the molecular neurodegeneration department at Amsterdam UMC we came up with a visual and interactive way to present their latest paper on tau protein aggregation and its effect on astrocytes.

🧵
#neuroscience #dementia #alzheimers #science #scicomm #design #UI #gamedev #ScienceMastodon #visualStorytelling #astrocytes

Distance-AF: Modifying Predicted Protein Structure Models by Alphafold2 with User-Specified Distance Constraints biorxiv.org/content/10.1101/20

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#proteomics #prot-preprint

Some local color from Rui Tavares' history of the Universal Declaration of Human Rights yesterday at CCB: Hannah Arendt lived briefly in Lisbon in 1941.

"Here, we summarize the latest insights into cellular uptake mechanisms and pathways in DCs. We highlight the approaches to study endocytosis, the impact of endocytosis routes on T cell response, and discuss the link between how DCs internalize therapeutic antibodies and the potential mechanisms that could give rise to immunogenicity"

onlinelibrary.wiley.com/doi/ab

"We hypothesized that elevated Gαq stimulation within the syncytiotrophoblast layer contributes to the pathogenesis of through disruption of normal redox balance and thus the induction of syncytiotrophoblast stress."

science.org/doi/10.1126/sciadv

"The book wasn’t published for two years, not before perestroika and Gorbachev. “After reading your book no one will fight,” the censor lectured me. “Your war is terrifying. Why don’t you have any heroes?” I wasn’t looking for heroes. I was writing history through the stories of its unnoticed witnesses and participants. They had never been asked anything."
- Svetlana Alexievich

nobelprize.org/prizes/literatu

Buster Keaton's "The General" at one of Lisbon's most special spots, a Cinemateca Portuguesa. Bonus: accompanied by a live pianist.

cinemateca.pt/Entrada.aspx

AlphaFold & PDL1

"Here, we test a protein design pipeline that uses iterative rounds of deep learning (DL)-based structure prediction (AlphaFold2) and sequence optimization (ProteinMPNN) to design autoinhibitory domains (AiDs) for a PD-L1 antagonist."

pnas.org/doi/10.1073/pnas.2307

In Portugal, as everywhere else in the world, if men could not vote, there would be no far right problem.

"(...) o Ch*ga é claramente mais masculino (mais oito pontos do que entre elas)."

dn.pt/politica/ps-alarga-dista

Labour peers urged to back fatal motion and protect worker's right to strike

"It's unthinkable, it's unworkable, it's almost certainly illegal and even worse the government is willing to outright lie to the public to get away with it"

thelondoneconomic.com/politics

PFKFB3 is a critical regulator of neutrophil metabolism and function in rheumatoid arthritis medrxiv.org/content/10.1101/20

PROTEOME-SCALE RECOMBINANT STANDARDS AND A ROBUST HIGH-SPEED SEARCH ENGINE TO ADVANCE CROSS-LINKING MS-BASED INTERACTOMICS biorxiv.org/content/10.1101/20

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#proteomics #prot-preprint

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